简单使用介绍

# 从 Singularity Hub build 镜像
singularity -d build lolcow.simg shub://GodloveD/lolcow

# 从 Docker Hub build 镜像
singularity -d build lolcow.simg docker://godlovedc/lolcow
singularity -d build centos.simg docker://centos
singularity -d build ubuntu.simg docker://ubuntu

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SINGULARITY_NOHTTPS=1 singularity -d build centos_test.simg docker://centos

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singularity exec centos_test.simg python test.py

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singularity shell centos_test.simg

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singularity shell -B /pengbing ~/test/centos_test.simg 
singularity shell -B /pengbing:/test ~/test/centos_test.simg

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process get_txt{

output:
file "*.txt" into next

"""
echo "this is test" > hello.txt
"""
}

process add_text{

input:
file hello from next

"""
cat $hello > final.txt
cp final.txt /pb
"""
}

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process.container = '/home/pengbing/centos_test.simg'
singularity.enabled = true
singularity.runOptions='-B /test:/pb -B /home/pengbing'

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简单使用介绍

简单使用介绍

# 参考

# 前言

# 相较于docker优缺点

# 优点

# 缺点

# 镜像文件

# 下载镜像

# 镜像使用

# 直接执行命令

# 进入交互界面

# nextflow调用